Services and custom-tailored projects

MSAID offers a variety of services that can be tailored to adress your needs. Talk to us to learn how our customized solutions can advance your data analysis pipelines and help you to gain advantage over your competitors.

  • Custom deep learning models: our generic deep learning framework provides the flexibility to expand our prediction capabilities and customize them to your needs, instruments, and infrastructure.
  • Custom in-silico spectral libraries: generating large spectral libraries is cumbersome, expensive, and rarely yields comprehensive and transferable results. Our deep learning models can generate spectral libraries of full proteomes for you. They are calibrated to your mass spectrometer setup and can be directly applied to the analysis of data dependent (DDA), data independent (DIA) and targeted proteomics (SRM/MRM/PRM) data.
  • Deep learning-based data analysis: we have developed next-generation data analysis services that reliably identify up to four times more peptide-spectrum matches than classical workflows. This increases the confidence in valuable biomarker candidates from new and existing data by at least one order of magnitude and boosts the productivity of your expensive LC-MS/MS equipment.
  • Consulting: with our long-standing expertise in proteomics and proteomic data analysis, we are the perfect partner to test, evaluate and improve your proteomics workflows. Together, we dig deeper into your samples, evaluate your data processing pipelines, or decide how to best equip your laboratory with the next generation of computing infrastructure.

Contact us for more information.